Reorganized Jmol packages: (revised 10:18 PM 4/26/2007) | +---jmol | | Jmol.properties | | | +---adapter | | \---smarter | | AdfReader.java | | Atom.java | | AtomSetCollection.java | | AtomSetCollectionReader.java | | Bond.java | | CifReader.java | | CsfReader.java | | CubeReader.java | | FoldingXyzReader.java | | GamessReader.java | | GaussianReader.java | | GhemicalMMReader.java | | HinReader.java | | JaguarReader.java | | JmeReader.java | | JmolDataReader.java | | Mol2Reader.java | | MolReader.java | | MopacDataReader.java | | MopacGraphfReader.java | | MopacReader.java | | NWChemReader.java | | OdysseyReader.java | | OdysseyXMLReader.java | | PdbReader.java | | PsiReader.java | | QchemReader.java | | Resolver.java | | ShelxReader.java | | SmarterJmolAdapter.java | | SpartanArchive.java | | SpartanReader.java | | SpartanSmolReader.java | | Structure.java | | V3000Reader.java | | WebMOReader.java | | XmlArgusReader.java | | XmlChem3dReader.java | | XmlCmlReader.java | | XmlMolproReader.java | | XmlOdysseyReader.java | | XmlReader.java | | XyzReader.java | | | +---api | | JmolAdapter.java | | JmolAppletInterface.java | | JmolBioResolver.java | | JmolSelectionListener.java | | JmolSimpleViewer.java | | JmolStatusListener.java | | JmolViewer.java | | | +---applet | | Console.java | | Jmol.java | | JmolAppletControl.java | | JmolAppletRegistry.java | | Jvm12.java | | | +---appletwrapper | | AppletWrapper.java | | ClassPreloader.java | | WrappedApplet.java | | WrappedAppletLoader.java | | | +---atomdata | | AtomData.java | | AtomDataServer.java | | AtomIndexIterator.java | | | +---bspt | | Bspf.java | | Bspt.java | | Element.java | | Leaf.java | | Node.java | | package.html | | SphereIterator.java | | Tuple.java | | | +---g3d | | Awt3D.java | | Circle3D.java | | Colix3D.java | | Cylinder3D.java | | Font3D.java | | Graphics3D.java | | Hermite3D.java | | Line3D.java | | Normix3D.java | | package.html | | Platform3D.java | | Rgb16.java | | Shade3D.java | | Sphere3D.java | | Swing3D.java | | Text3D.java | | Triangle3D.java | | | +---geodesic | | EnvelopeCalculation.java | | Geodesic.java | | | +---i18n | | GT.java | | | +---jvxl | | +---api | | | MeshDataServer.java | | | VertexDataServer.java | | | | | +---calc | | | MarchingCubes.java | | | MarchingSquares.java | | | | | +---data | | | JvxlData.java | | | MeshData.java | | | VolumeData.java | | | | | +---readers | | | ApbsReader.java | | | AtomDataReader.java | | | CubeReader.java | | | IsoFxyReader.java | | | IsoMepReader.java | | | IsoMOReader.java | | | IsoPlaneReader.java | | | IsoShapeReader.java | | | IsoSolventReader.java | | | JvxlReader.java | | | Parameters.java | | | SurfaceGenerator.java | | | VolumeDataReader.java | | | VolumeFileReader.java | | | VoxelReader.java | | | | +---modelframe | | Atom.java | | AtomIterator.java | | Bond.java | | BondIterator.java | | Chain.java | | Frame.java | | Group.java | | Mmset.java | | Model.java | | ModelManager.java | | Polymer.java | | | +---popup | | JmolPopup.java | | JmolPopupAwt.java | | JmolPopupSwing.java | | PopupResourceBundle.java | | | +---quantum | | MepCalculation.java | | MOCalculation.java | | MopacData.java | | QuantumCalculation.java | | | +---shape | | AtomShape.java | | Axes.java | | AxesRenderer.java | | Balls.java | | BallsRenderer.java | | Bbcage.java | | BbcageRenderer.java | | Closest.java | | Dipole.java | | Dipoles.java | | DipolesRenderer.java | | Dots.java | | DotsRenderer.java | | Echo.java | | EchoRenderer.java | | FontLineShape.java | | Frank.java | | FrankRenderer.java | | GeoSurface.java | | GeoSurfaceRenderer.java | | Halos.java | | HalosRenderer.java | | Hover.java | | HoverRenderer.java | | Labels.java | | LabelsRenderer.java | | Measures.java | | MeasuresRenderer.java | | Shape.java | | ShapeRenderer.java | | Stars.java | | StarsRenderer.java | | Sticks.java | | SticksRenderer.java | | Text.java | | TextShape.java | | Uccage.java | | UccageRenderer.java | | Vectors.java | | VectorsRenderer.java | | | +---shapebio | | AlphaMonomer.java | | AlphaPolymer.java | | AminoMonomer.java | | AminoPolymer.java | | Backbone.java | | BackboneRenderer.java | | BioPolymer.java | | CarbohydrateMonomer.java | | CarbohydratePolymer.java | | Cartoon.java | | CartoonRenderer.java | | Helix.java | | MeshRibbon.java | | MeshRibbonRenderer.java | | Monomer.java | | Mps.java | | MpsRenderer.java | | NucleicMonomer.java | | NucleicPolymer.java | | PhosphorusMonomer.java | | PhosphorusPolymer.java | | ProteinStructure.java | | Resolver.java | | Ribbons.java | | RibbonsRenderer.java | | Rockets.java | | RocketsRenderer.java | | Sheet.java | | Strands.java | | StrandsRenderer.java | | Trace.java | | TraceRenderer.java | | Turn.java | | | +---shapespecial | | Draw.java | | DrawMesh.java | | DrawRenderer.java | | Isosurface.java | | IsosurfaceMesh.java | | IsosurfaceRenderer.java | | LcaoCartoon.java | | LcaoCartoonRenderer.java | | Mesh.java | | MeshCollection.java | | MeshFileCollection.java | | MeshRenderer.java | | MolecularOrbital.java | | MolecularOrbitalRenderer.java | | Pmesh.java | | PmeshRenderer.java | | Polyhedra.java | | PolyhedraRenderer.java | | | +---smiles | | InvalidSmilesException.java | | package.html | | SmilesAtom.java | | SmilesBond.java | | SmilesMolecule.java | | SmilesParser.java | | | +---symmetry | | HallInfo.java | | SpaceGroup.java | | SymmetryOperation.java | | UnitCell.java | | | +---translation | | +---Jmol | | | ca.po | | | cs.po | | | de.po | | | es.po | | | et.po | | | fr.po | | | Jmol.pot | | | nl.po | | | pt.po | | | tr.po | | | | | \---JmolApplet | | ca.po | | cs.po | | de.po | | es.po | | et.po | | fr.po | | JmolApplet.pot | | nl.po | | pt.po | | tr.po | | | +---util | | ArrayUtil.java | | Base64.java | | BinaryDocument.java | | BitSetUtil.java | | ColorEncoder.java | | CommandHistory.java | | CompoundDocument.java | | DefaultLogger.java | | Escape.java | | Int2IntHash.java | | Int2ObjHash.java | | IntInt2ObjHash.java | | JpegEncoder.java | | Logger.java | | LoggerInterface.java | | Measure.java | | Parser.java | | PatternMatcher.java | | TempArray.java | | TextFormat.java | | | +---vecmath | | Point3fi.java | | | +---viewer | | ColorManager.java | | Compiler.java | | Eval.java | | FileManager.java | | FrameExportJmolAdapter.java | | FrameRenderer.java | | JmolConstants.java | | Measurement.java | | MouseManager.java | | MouseManager10.java | | MouseManager11.java | | MouseManager14.java | | MouseWrapper11.java | | MouseWrapper14.java | | PendingMeasurement.java | | PickingManager.java | | PropertyManager.java | | RepaintManager.java | | ScriptManager.java | | SelectionManager.java | | StateManager.java | | StatusManager.java | | Token.java | | TransformManager.java | | TransformManager10.java | | TransformManager11.java | | Viewer.java | | | \---_documents | crystal_ionic_radii.xls | ionicRadia11.xls | jmolpopup.htm | jmolpopupmenu.js | nucleotide_comparisons.pdf | radii.xls | viewer.gif | Applet packaging: 04/26/2007 10:11 PM 3,566,325 Jmol.jar 04/26/2007 10:11 PM 996,679 JmolApplet.jar 04/26/2007 10:11 PM 10,974 JmolApplet0.jar 04/26/2007 10:11 PM 58,170 JmolApplet1.jar 04/26/2007 10:11 PM 55,996 JmolApplet2.jar 04/26/2007 10:11 PM 96,721 JmolApplet3.jar 04/26/2007 10:11 PM 147,094 JmolApplet4.jar 04/26/2007 10:11 PM 172,772 JmolApplet5.jar 04/26/2007 10:11 PM 360,555 JmolApplet6.jar 04/26/2007 10:11 PM 98,211 JmolApplet_i18n.jar 04/18/2007 01:52 AM 59,310 Jvxl.jar 11 File(s) 5,622,807 bytes 0 Dir(s) 62,677,147,648 bytes free